[premise-users] using Picard tools (MarkDuplicates)

Bryan Barney bryan.barney at gmail.com
Wed Nov 14 17:41:15 EST 2018


Hello,

I cannot seem to find the syntax for using Picard tools on COLSA... I've
tried:

module load linuxbrew/colsa
java -jar picard.jar MarkDuplicates REMOVE_DUPLICATES=true..... etc

yet I get the error message:

Unable to access jarfile picard.jar

Anyone know the syntax to use the Picard tools?

Thanks!
-Bryan Barney
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.sr.unh.edu/pipermail/premise-users/attachments/20181114/49e0e32a/attachment.html>


More information about the premise-users mailing list